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Computational Microscopy Laboratory
Tuesday, 28 March 2006

Image The Computational Microscopy Laboratory (CML) -located in Room M210, Massman Research Building, conducts research in the use of computers to extract more information from microscopical images. This research includes the characterization of the different microscopes, such as brightfield fluorescence microscopy and confocal scanning fluorescence microscopy (CSFM); reflected light microscopy, differential interference contrast (DIC). Research on CSFM covers several approaches to confocality and to partial confocality including single-aperture confocal scanning microscopes (CSM's) as well as multiple-aperture CSM's or tandem scanning microscopes (TSM's) such as the Newport confocal adaptor.

Last Updated ( Tuesday, 18 April 2006 )
 
Microscopes
Tuesday, 28 March 2006
  • Olympus BX-50 upright microscope Equiped for fluorescence, transmitted light, Zernike phase contrast, and Nomarski differential interference contrast.
  • Zeiss Axioplan 2 upright microscope Equiped for fluorescence, transmitted light, Zernike phase contrast, and Normarski differential interference contrast. The microscope is controlled by Zeiss Axiovision software for data acquisition and image manipulation and processing.

 

Last Updated ( Tuesday, 28 March 2006 )
 
Computer Resources
Tuesday, 28 March 2006
  • Silicon Graphics Inc. Origin200, Four R10000/180MHz CPU's, 2.3 Gigabytes RAM and DAT tape-drive for archival and back-up,
  • Silicon Graphics, Inc. Origin 2100 Four R12000/350MHz CPU's and 5 GBytes RAM
  • Silicon Graphics, Inc. Origin 350 Eight R16000/700 MHz CPU's and 8 GBytes RAM.
  • Silicon Graphics, Inc. Altix   350 Four Itanium 2 CPU's and 4 GBytes RAM.
  • Advanced Clustering Technologies Eight Atlon processors and 8 GBytes RAM.
  • Two Apple Macintosh G5 computers (at Mr. Smith's and Dr. Conchello's offices)
  • Three PC-compatibles running Windows XP are available, two for controlling the microscopes and one for software development.
  • CD burners are available at Dr. Conchello's and Mr. Smith's offices and at two of the PC-compatibles. In addition most computers are equiped with 750 MBytes zip drives for faster data portability.

 

Last Updated ( Tuesday, 28 March 2006 )
 
Collaborators
Tuesday, 28 March 2006

 

Last Updated ( Tuesday, 28 March 2006 )
 
Personnel
Tuesday, 28 March 2006
  • Jos?-Angel Conchello, Ph. D. Head of the Computational Microscopy Laboratory
  • Joanne Markham (Radiology Department, Washington University School of Medicne) Staff Scientist (algorithm development and evaluation, computer programming).
  • Danny G. Smith, System/Network manager; Web page developing and maintenance.
  • Krishnaveni Mohanraj, Staff engineer (scientific programing, microscope automation).